36 graphite - a Bioconductor package to convert pathway topology to gene network.
http://www.biomedcentral.com/1471-2105/13/20
35 PhiSiGns: an online tool to identify signature genes in phages and design PCR primers for examining phage diversity.
http://www.biomedcentral.com/1471-2105/13/37/abstract
34 BLANNOTATOR: enhanced homology-based function prediction of bacterial proteins.
http://www.biomedcentral.com/1471-2105/13/33/abstract
33 Protein docking prediction using predicted protein-protein interface.
http://www.biomedcentral.com/1471-2105/13/7
32 miRTrail - a comprehensive webserver for analyzing gene and miRNA patterns to enhance the understanding of regulatory mechanisms in diseases.
http://www.biomedcentral.com/1471-2105/13/36/abstract
31 Robust Detection of Hierarchical Communities from Escherichia coli Gene Expression Data.
http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1002391
30 Novel Approach to Meta-Analysis of Microarray Datasets Reveals Muscle Remodeling-related Drug Targets and Biomarkers in Duchenne Muscular Dystrophy.
http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1002365
29 A unique algorithm implemented in the program MOSAICS (Methodologies for Optimization and Sampling in Computational Studies) that is capable of nanoscale modeling without compromising the resolution of interest.
http://www.pnas.org/content/109/8/2890
28 Predicting Metal-Binding Sites from Protein Sequence.
http://www.computer.org/csdl/trans/tb/2012/01/ttb2012010203-abs.html
27 A Memory Efficient Method for Structure-Based RNA Multiple Alignment.
http://www.computer.org/csdl/trans/tb/2012/01/ttb2012010001-abs.html
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